2007
Beuve, M., Sempé, L. & Lemaire, O. (2007). A sensitive one-step real-time RT-PCR method for detecting Grapevine leafroll-associated virus 2 variants in grapevine. Journal of Virological Methods 141(2): 117-124.
Brault, V., Herrbach, E., Reinbold, C. (2007). Electron microscopy studies on luteovirid transmission by aphids. Micron 38 (3): 302-312.
Chen, W. J., Delmotte, F., Richard-Cervera, S., Douence, S., Greif, C., Corio-Costet, M.F. (2007). At least two origins of fungicide resistance in grapevine downy mildew populations. Applied and Environmental Microbiology 73 (16): 5162-5172.
Article
Demangeat, G. (2007). Transmission des Nepovirus par les nématodes Longidoridae. Virologie 11 (4): 309-321.
Article
Diez Navajas, A., Greif, C., Poutaraud, A., Merdinoglu, D. (2007). Two simplified fluorescent staining techniques to observe infection structures of the oomycete Plasmopara viticola in grapevine leaf tissues. Micron 38: 680-683.
Fuchs, M., Cambra, M., Capote, N., Jelkmann, W., Kundu, J., Laval, V., Martelli, G.P., Minafra, A., Petrovic, N., Pfeiffer, P., Pompe-Novak, M., Ravelonandro, M., Saldarelli, P., Stussi-Garaud, C., Vigne, E., Zagrai, I. (2007). Safety assessment of transgenic plums and grapevines expressing viral coat protein genes: New insights into real environmental impact of perennial plants engineered for virus resistance. Journal of Plant Pathology, 89 (1): 5-12.
Article
Jaillon, O., Aury, J-M. , Noel, B., Policriti, A., Clepet, C., Casagrande, A., Choisne, N., Aubourg ,S., Vitulo, N., Jubin, C., Vezzi, A., Legeai, F., Hugueney, P., Dasilva, C., Horner, D., Mica, E., Jublot, D., Poulain, J., Bruyère, C., Billault, A., Segurens, B., Gouyvenoux, M., Ugarte, E., Cattonaro, F., Anthouard ,V., Vico, V., Del Fabbro, C., Alaux, M., Di Gaspero, G., Dumas, V., Felice, N., Paillard, S., Juman, I., Moroldo, M., Scalabrin, S., Canaguier, A., Le Clainche, I., Malacrida, G., Durand, E., Pesole, G., Laucou, V., Chatelet, P., Merdinoglu, D., Delledonne, M., Pezzotti, M., Lecharny, A., Scarpelli, C., Artiguenave, F., Pè, M. E., Valle, G., Morgante, M., Caboche, M., Adam-Blondon, A-F., Weissenbach, J., Quétier, F., Wincker, P. (2007).The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature 449: 463-467.
Abstract
Klein, E., Link, D., Schirmer, A., Erhardt, M., Gilmer, D. (2007). Sequence variation within Beet necrotic yellow vein virus p25 protein influences its oligomerization and isolate pathogenicity on Tetragonia expansa. Virus Research 126: 53-61.
Komar, V., Vigne, E., Demangeat, G., Fuchs, M. (2007). Beneficial effect of selective virus elimination on the performance of Vitis vinifera cv. Chardonnay. American Journal of Enology and Viticulture 58 (2): 202-210.
Abstract
Kozlowska-Makulska, A., Szyndel, M.S., Syller, J., Bouzoubaa, S., Beuve, M., Lemaire, O. & Herrbach, E. (2007). First report on the natural occurrence of Beet chlorosis virus in Poland. Plant Disease 91 (3): 326.
Article
Legras, J-L., Merdinoglu, D., Cornuet, J-M., Karst, F. (2007). Bread, beer and wine: Saccharomyces cerevisiae diversity reflects human history. Molecular Ecology 16 (10): 2091–2102.
Le Jeune, C., Lollier, M., Demuyter, C., Erny, C., Legras, J.-L., Aigle, M., Masneuf-Pomarède, I. (2007). Characterization of natural hybrids of Saccharomyces cerevisiae and Saccharomyces bayanus var. uvarum. FEMS Yeast Research 7: 540-549.
Oswald, M., Fischer, M., Dirninger, N., Karst, F. (2007). Monoterpenoid biosynthesis in Saccharomyces cerevisiae. FEMS Yeast Research 7(3): 413-421.
Pelsy, F. (2007) UnTranslated Leader region polymorphism of Tvv1, a retrotransposon family, is a novel marker useful for analyzing genetic diversity and relatedness in the genus Vitis. Theoretical and Applied Genetics 116: 15-27.
Abstract
Pompe-Novak, M., Gutiérrez-Aguirre, I., Vojvoda, J., Blas, M., Tomazic, I., Vigne, E., Fuchs, M., Ravnikar, M., Petrovic, N. (2007). Genetic variability within RNA2 of Grapevine fanleaf virus. European Journal of Plant Pathology 117 (3): 307-312.
Poutaraud, A., Latouche, G., Martins, S., Meyer, S., Merdinoglu, D., Cerovic, Z. G (2007). Fast and local assessment of stilbene content in grapevine leaf by in vivo fluorometry. Journal of Agricultural and Food Chemistry 55 (13): 4913-4920.
Abstract
2008
Beuve, M., Stevens, M., Liu, H.Y., Wintermantel, W.M., Hauser, S., Lemaire, O. (2008). Biological and molecular characterization of an American sugar beet-infecting Beet western yellows virus (BWYV) isolate. Plant Disease 92(1): 51-60.
Abstract
Díez-Navajas, A.M., Wiedemann-Merdinoglu, S., Greif, C., Merdinoglu, D. (2008). Nonhost vs. host resistance to the grapevine downy mildew, Plasmopara viticola, studied at the tissue level. Phytopathology 98(7): 777-780.
Article
Hommay, G., Komar, V., Lemaire, O., Herrbach, E. (2008). Grapevine virus A (GVA, Vitivirus) transmission by larvae of the soft scale Parthenolecanium corni (Hem.: Coccidae). European Journal of Plant Pathology 121: 185-188.
Komar, V., Vigne, E., Demangeat, G., Lemaire, O., Fuchs, M. (2008). Cross-protection as control strategy against Grapevine fanleaf virus in naturally infected vineyards. Plant Disease 92 (12): 1689-1694.
Abstract
Moisy, C., Garrison, K., Meredith, C.P., Pelsy, F. (2008) Characterization of ten novel Ty1 copia-like retrotransposon families of the grapevine genome. BMC Genomics 9: 469.
Article
Moisy, C., Blanc, S., Duchêne, E., Merdinoglu, D., Pelsy, F. (2008). Structural variability of Tvv1 grapevine retrotransposons can be caused by illegitimate recombination. Theoretical and Applied Genetics 116 (5): 671-682.
Rahier, A., Pierre, S., Riveill, G., Karst, F. (2008). Identification of essential amino acid residues in a sterol 8, 7-isomerase from Zea mays reveals functional homology and diversity with the isomerases of animal and fungal origin. Biochemical Journal 414(2): 247-259.
Santos-Rosa, M., Poutaraud, A., Merdinoglu, D., Mestre, P. (2008). Development of a transient expression system in grapevine via agro-infiltration. Plant Cell Reports 27 (6): 1053-1063.
Schmidlin, L., Poutaraud, A., Claudel, P., Mestre, P., Prado, E., Santos-Rosa, M., Wiedemann-Merdinoglu, S., Karst, F., Merdinoglu, D., Hugueney, P. (2008). A Stress-Inducible Resveratrol O-Methyltransferases Involved in the Biosynthesis of Pterostilbene in Grapevine. Plant Physiology 148: 1630–1639.
Vigne, E., Marmonier, A., Fuchs, M. (2008). Multiple interspecies recombination events within RNA2 of Grapevine fanleaf virus and Arabis mosaic virus. Archives of Virology 153: 1771-1776.
2009
Bellin, D., Peressotti, E., Merdinoglu, D., Wiedemann-Merdinoglu, S., Adam-Blondon, A.F., Cipriani, G., Morgante, M., Testolin, R., Di Gaspero, G. (2009). Resistance to Plasmopara viticola in grapevine ‘Bianca’ is controlled by a major dominant gene causing localized necrosis at the infection site. Theoretical and Applied Genetics 120(1): 163-176.
Bertsch, C., Beuve, M., Dolja, V., Wirth, M., Pelsy, F., Herrbach, E., Lemaire, O. (2009). Retention of the virus-derived sequences in the nuclear genome of grapevine as a potential pathway to virus resistance. Biology Direct 4: 21.
Charpentier, C., Colin, A., Alais, A., Legras, J.-L. (2009). French Jura flor yeasts: genotype and technological diversity. Antonie van Leeuwenhoek 95(3): 263-273.
Chong, J., Poutaraud, A., Hugueney, P. (2009). Metabolism and roles of stilbenes in plants. Plant Science 177: 143-155.
Duchêne, E., Butterlin, G., Claudel, P., Dumas, V., Jaegli, N., Merdinoglu, D. (2009). A grapevine (Vitis vinifera L.) deoxy-D-xylulose synthase gene colocates with a major quantitative trait loci for terpenol content. Theoretical and Applied Genetics 118: 541–552.
Abstract
Duchêne, E., Legras, J.-L., Karst, F., Merdinoglu, D., Claudel, P., Jaegli, N., Pelsy, F. (2009). Variation of linalool and geraniol content within two pairs of aromatic and non-aromatic grapevine clones. Australian Journal of Grape and Wine Research 15(2): 120-130.
Ezeronye, O. U., Legras, J.-L. (2009). Genetic analysis of Saccharomyces cerevisiae strains isolated from palm wine in eastern Nigeria. Comparison with other African strains. Journal of Applied Microbiology 106(5): 1569-1578.
Fischer, M., Farine, S., Chong, J., Guerlain, P., Bertsch, C. (2009). The direct toxicity of BABA against grapevine ecosystem organisms. Crop Protection 28: 710-712.
Hugueney, P., Provenzano, S., Verriès, C., Ferrandino, A., Meudec, E., Batelli, G., Merdinoglu, D., Cheynier, V., Schubert, A., Ageorges, A. (2009). A novel cation-dependent O-methyltransferase involved in anthocyanin methylation in grapevine. Plant Physiology 150: 2057-2070.
Kozlowska-Makulska, A., Beuve, M., Syller, J., Szyndel, M., Lemaire O., Bouzoubaa, S., Herrbach, E. (2009). Aphid transmissibility of different European beet polerovirus isolates. European Journal of Plant Pathology 125 (2): 337-341.
Kuranda, K., Grabinska, K., Berges, T., Karst, F., Leberre, V., Sokol, S., Francois, J., Palamarczyk, G. (2009). The YTA7 gene is involved in the regulation of the isoprenoid pathway in the yeast Saccharomyces cerevisiae. FEMS Yeast Research 9(3): 381-390.
Laimer, M., Lemaire, O., Herrbach, E., Goldschmidt, V., Minafra, A., Bianco, P., Wetzel, T. (2009). Resistance to viruses, phytoplasmas and their vectors in grapevine in Europe: a review. Journal of Plant Pathology 91 (1): 7-23.
Le Henanff, G. , Heitz, T., Mestre, P., Mutterer, J., Walter, B., Chong, J. (2009). Characterization of Vitis vinifera NPR1 homologs involved in the regulation of Pathogenesis-Related gene expression. BMC Plant Biology 9: 54.
Article
Marguerit, E., Boury, C., Manicki, A., Donnart, M., Butterlin, G., Némorin, A., Wiedemann-Merdinoglu, S., Merdinoglu, D., Ollat, N., Decroocq, S. (2009). Genetic dissection of sex determinism, inflorescence morphology and downy mildew resistance in grapevine. Theoretical and Applied Genetics 118: 1261–1278.
Novo, M., Bigey, F., Beyne, E., Galeote, V., Gavory, F., Mallet, S., Cambon, B., Legras, J.-L., Wincker, P., Casaregola, S., Dequin, S. (2009). Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118. Proceedings of the National Academy of Sciences of the USA (PNAS) 106(38): 16333-16338.
Article
Vigne, E., Marmonier, A., Komar, V., Lemaire, O., Fuchs, M. (2009). Genetic structure and variability of virus populations in cross-protected grapevines superinfected by Grapevine fanleaf virus following nematode-mediated transmission. Virus Research 144: 154-162.
2010
Bencharki, B., Boissinot, S., Revollon, S., Ziegler-Graff, V., Erdinger, M., Wiss, L., Dinant, S., Renard, D., Beuve, M., Lemaitre-Guillier, C., Brault, V. (2010). Phloem protein partners of Curcurbit aphid borne yellows virus: possible involvement of phloem PP2 lectins in virus transmission by aphids. Molecular Plant-Microbe Interactions 23(6): 799-810.
Abstract
Bergeault, K., Bertsch, C., Merdinoglu D., Walter B. (2010). Low level of polymorphism in two putative NPR1homologs in the Vitaceaefamily. Biology Direct 2010, 5:9.
Brault, V., Tanguy, S., Reinbold, C., Le Trionnaire, G., Arneodo, J., Jaubert-Possamai, S., Guernec, G. and Tagu, D. (2010). Transcriptomic analysis of intestinal genes deregulated following acquisition of Pea enation mosaic virus by the pea aphid Acyrthosiphon pisum. Journal of General Virology 91, 802-808.
Brault, V., Uzest, M., Monsion, B., Jacquot, E., Blanc, S.. Aphids as transport devices for plant viruses. Comptes Rendus Biologies 333(6-7): 524-538.
Deglène-Benbrahim, L., Wiedemann-Merdinoglu, S., Merdinoglu, D., Walter, B. (2010). Evaluation of Downy Mildew Resistance in Grapevine by Leaf Disc Bioassay with In Vitro- and Greenhouse-Grown Plants. American Journal of Enology and Viticulture 61(4): 521-528.
Abstract
Demangeat, G., Komar, V., Van-Ghelder, C., Voisin, R., Lemaire, O., Esmenjaud, D., Fuchs, M. (2010). Transmission Competency of Single-Female Xiphinema index Lines for Grapevine fanleaf virus. Phytopathology 100(4): 384-389.
Abstract
Duchêne, E., Huard, F., Dumas, V., Schneider, C., Merdinoglu, D. (2010). The challenge of adapting grapevine varieties to climate change. Climate Research 41(3):193-204.
Abstract
Hamm, G., Carré, V., Poutaraud, A., Maunit, B., Frache, G., Merdinoglu, D., Muller, J.-F. (2010). Determination and imaging of metabolites from Vitis vinifera leaves by laser desorption/ionisation time-of-flight mass spectrometry. Rapid Communications in Mass Spectrometry 24(3): 335 - 342.
Komar, V., Vigne, E., Demangeat, G., Lemaire, O., Fuchs, M. (2010). Comparative Performance Analysis of Virus-Infected Vitis vinifera cv. Savagnin rose Grafted onto Three Rootstocks. American Journal of Enology and Viticulture 61(1): 68-73.
Abstract
Kozlowska-Makulska, A., Guilley, H., Szyndel, M., Beuve, M., Lemaire, O., Herrbach, E. & Bouzoubaa, S. (2010). The P0 proteins of European beet-infecting poleroviruses display variable silencing suppressor activity. Journal of General Virology 91(4): 1082-1091.
Legras, J. L., Erny, C., Le Jeune, C., Lollier, M., Adolphe, Y., Demuyter, C., Delobel, P., Blondin, B., Karst, F. (2010). Activation of Two Different Resistance Mechanisms in Saccharomyces cerevisiae upon Exposure to Octanoic and Decanoic Acids. Applied and Environmental Microbiology 76(22): 7526-7535.
Abstract
Lorber, B., Sauter, C., Théobald-Dietrich, A., Moreno, A., Schellenberger, P., Robert, M.-C., Capelle, B., Sanglier, S., Potier, N., Giegé, R.. (2010). Crystal growth of proteins, nucleic acids, and viruses in gels. Progress in Biophysics and Molecular Biology 101(1-3): 13-25.
Marmonier, A., Schellenberger, P., Esmenjaud, D., Schmitt-Keichinger, C., Ritzenthaler, C., Andret-Link, P., Lemaire, O., Fuchs, M., Demangeat, G. (2010). The coat protein determines the virus specific transmission by Xiphinema diversicaudatum. Journal of Plant Pathology 92(1): 275-279.
Oliver, J. E., Vigne, E., Fuchs, M. (2010). Genetic structure and molecular variability of Grapevine fanleaf virus populations. Virus Research 152(1-2): 30-40.
Pelsy, F., Hocquigny, S., Moncada, X., Barbeau, G., Forget, D., Hinrichsen, P., Merdinoglu, D. (2010). An extensive study of the genetic diversity within seven French wine grape variety collections. Theoretical and Applied Genetics 120(6): 1219-1231.
Pelsy, F. (2010). Molecular and cellular mechanisms causing diversity within grapevine varieties. Heredity 104(4): 331–340.
Abstract
Peressotti, E., Wiedemann-Merdinoglu, S., Delmotte, F., Bellin, D., di Gaspero, G., Testolin, R., Merdinoglu, D., Mestre, P.. Breakdown of resistance to grapevine downy mildew upon limited deployment of a resistant variety. BMC Plant Biology 2010, 10:147.
Article
Poutaraud, A., Latouche, G., Cerovic, Z. G., Merdinoglu, D. (2010). Quantification of stilbenes in grapevine leaves by direct fluorometry and high performance chromatography: spatial localization and time course of synthesis. Journal International des Sciences de la Vigne et du Vin, special issue Macrowine 43(2): 27-32.
Revollon, S., Strub, J.M., Fitchette, A-C., Wiss, L., Gomord, V., Vandersoeller, A., Brault, V. (2010) A reinvestigation shows the absence of sugar residues on structural proteins of poleroviruses and discard involvement of glycosylation in aphid transmission process. Virology 402(2): 303-314.
Schellenberger, P., Andret-Link, P., Schmitt-Keichinger, C., Bergdoll, M., Marmonier, A., Vigne, E., Lemaire, O., Fuchs, M., Demangeat, G., Ritzenthaler, C. (2010). A Stretch of 11 Amino Acids in the βB-βC Loop of the Coat Protein of Grapevine Fanleaf VirusIs Essential for Transmission by the Nematode Xiphinema index. Journal of Virology 84(16): 7924–7933.
Abstract
Tamborindeguy, C., Monsion, B., Brault, V., Hunnicutt, L., Ju, H.J., Nakabachi, A. and Van Fleet, E. (2010). A genomic analysis of virus transcytosis in the pea aphid Acyrthosiphon pisum. Insect Molecular Biology 19(s2): 259 - 272.
The International Aphid Genomics Consortium (2010). Genome sequence of the pea aphid Acyrthosiphon pisum. PloS Biology 8(2): e1000313.
Article
The Local Monitoring Committee, Lemaire, O., Moneyron, A., Masson J. E. (2010). ‘‘Interactive Technology Assessment’’ and Beyond: the Field Trial of Genetically Modified Grapevines at INRAColmar. PLoS Biology 8(11): e1000551.
Article
2011
Atkins, C. A., Smith, P. M. C., Rodriguez-Medina, C. (2011). Macromolecules in phloem exudates - a review. Protoplasma 248(1): 165-172.
Blasi, P., Blanc, S., Wiedemann-Merdinoglu, S., Prado, E., Rühl, E. H., Mestre, P., Merdinoglu, D. (2011). Construction of a reference linkage map of Vitis amurensis and genetic mapping of Rpv8, a locus conferring resistance to grapevine downy mildew. Theoretical and Applied Genetics 123(1):43-53.
Bonnefond, L., Schellenberger, P., Basquin, J., Demangeat, G., Ritzenthaler, C., Chênevert, R., Balg, C., Frugier, M., Rudinger-Thirion, J., Giegé, R., Lorber, B., Sauter, C. (2011). Exploiting Protein Engineering and Crystal Polymorphism for Successful X-ray Structure Determination. Crystal Growth & Design 11(10): 4334–4343.
Abstract
Fischer, M.J.C., Pensec, F., Demangeat, G., Farine, S., Chong, J., Ramírez-Suero, M., Mazet, F., Bertsch, C. (2011). Impact of Quillaja saponaria saponins on grapevine ecosystem organisms. Antonie Van Leeuwenhoek 100(2): 197-206.
Fischer, M.J.C., Meyer, S., Claudel, P., Bergdoll, M., Karst, F. (2011). Metabolic engineering of monoterpene synthesis in yeast. Biotechnology and Bioengineering 108(8): 1883-1892.
Abstract
Fischer, M.J.C., Meyer, S., Claudel, P., Bergdoll, M., Karst, F. (2011). Identification of a lysine residue important for catalytic activity of yeast farnesyl diphosphate synthase. The Protein Journal 30(5): 334-339.
Fournier-Level, A., Hugueney, P., Verries, C., This, P., Ageorges, A. (2011). Genetic mechanisms underlying the methylation level of anthocyanins in grape (Vitis vinifera L.). BMC Plant Biology 2011 11:179.
Article
Le Henanff, G., Farine, S., Kieffer-Mazet, F., Miclot, A.S., Heitz, T., Mestre, P., Bertsch, C., Chong, J. (2011). Vitis vinifera VvNPR1.1 is the functional ortholog of AtNPR1 and its overexpression in grapevine triggers constitutive activation of PR genes and enhanced resistance to powdery mildew. Planta 234(2): 405-417.
Peressotti, E., Duchêne, E., Merdinoglu, D., Mestre, P. (2011). A semi-automatic non-destructive method to quantify grapevine downy mildew sporulation. Journal of Microbiological Methods 84(2): 265-271.
Ruiz, N., Mathieu, J., Célini, L., Rollard, C., Hommay, G., Iorio, E., Lavelle, P. (2011). IBQS: A synthetic index of soil quality based on soil macro-invertebrate communities. Soil Biology & Biochemistry 43(10): 2032-2045.
Abstract
Schellenberger, P., Demangeat, G., Lemaire, O., Ritzenthaler, C., Bergdoll, M., Oliéric, V., Sauter, C., Lorber, B. (2011). Strategies for the Crystallization of Viruses : using phase diagrams and gels to produced 3D crystals of Grapevine fanleaf virus. Journal of Structural Biology 174(2): 344-351.
Schellenberger, P., Sauter, C., Lorber, B., Bron, P., Trapani, S., Bergdoll, M., Lemaire, O., Demangeat, G.*, Ritzenthaler, C.* (2011). Structural Insights into Viral Determinants of Nematode Mediated Grapevine fanleaf virus Transmission. PloS Pathogen 7(5): e1002034.
* senior co-authors.
